Highly Pathogenic Avian Influenza (HPAI) H5N1 HA clade prediction
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Database is being updated! Load times may be slow and some Sequences/Genomes may be incomplete!
Search Segment Database By:
Host(s)
Continent(s)/Countries
Clade(s)
Any
Avian
Blow fly
Canine
Cat
Civet
Environment
Human
Leopard
Mink
Pika
Plateau pika
Raccoon dog
Stone marten
Swine
Tiger
Any
Africa
Antartica
Eurasia
North America
Oceania
South America
Any
0
Outliers
1
2.1.1
2.1.2
2.1.3
2.2
2.3.1
2.3.2
2.3.3
2.3.4
2.4
2.5
3
4
5
6
7
8
9
Year From
-
To
-
Text (e.g., Nigeria)
Date Processed:
YYYY
-
MM
-
DD
-
-
Total Results: 3778
< 1
A/Canada goose/Bavaria/4/2007
2.2
GU046760
Avian
Germany
2007
2010-01-27
Yes
New Sequence!
A/common pochard/Bavaria/30/2006
2.2
GU046722
Avian
Germany
2006
2010-01-27
Yes
New Sequence!
A/goosander/Bavaria/34/2006
2.2
GU046730
Avian
Germany
2006
2010-01-27
Yes
New Sequence!
A/great crested grebe/Bavaria/31/2006
2.2
GU046724
Avian
Germany
2006
2010-01-27
Yes
New Sequence!
A/greylag goose /Bavaria/11/2007
2.2
GU046772
Avian
Germany
2007
2010-01-27
Yes
New Sequence!
A/mute swan/Bavaria/3/2007
2.2
GU046758
Avian
Germany
2007
2010-01-27
Yes
New Sequence!
A/swan/Bavaria/2/2007
2.2
GU046754
Avian
Germany
2007
2010-01-27
Yes
New Sequence!
A/swan/Bavaria/23/2006
2.2
GU046706
Avian
Germany
2006
2010-01-27
Yes
New Sequence!
A/swan/Bavaria/24/2006
2.2
GU046708
Avian
Germany
2006
2010-01-27
Yes
New Sequence!
A/swan/Bavaria/25/2006
2.2
GU046710
Avian
Germany
2006
2010-01-27
Yes
New Sequence!
A/swan/Bavaria/28/2006
2.2
GU046718
Avian
Germany
2006
2010-01-27
Yes
New Sequence!
A/swan/Bavaria/29/2006
2.2
GU046720
Avian
Germany
2006
2010-01-27
Yes
New Sequence!
A/swan/Bavaria/32/2006
2.2
GU046726
Avian
Germany
2006
2010-01-27
Yes
New Sequence!
A/swan/Bavaria/33/2006
2.2
GU046728
Avian
Germany
2006
2010-01-27
Yes
New Sequence!
A/swan/Bavaria/5/2007
2.2
GU046762
Avian
Germany
2007
2010-01-27
Yes
New Sequence!
A/swan/Bavaria/6/2007
2.2
GU046764
Avian
Germany
2007
2010-01-27
Yes
New Sequence!
A/swan/Bavaria/7/2007
2.2
GU046766
Avian
Germany
2007
2010-01-27
Yes
New Sequence!
A/swan/Bavaria/8/2007
2.2
GU046768
Avian
Germany
2007
2010-01-27
Yes
New Sequence!
A/swan/Bavaria/9/2007
2.2
GU046770
Avian
Germany
2007
2010-01-27
Yes
New Sequence!
A/tufted duck/Bavaria/26/2006
2.2
GU046712
Avian
Germany
2006
2010-01-27
Yes
New Sequence!
A/tufted duck/Bavaria/27/2006
2.2
GU046716
Avian
Germany
2006
2010-01-27
Yes
New Sequence!
A/wild duck/Bavaria/12/2007
2.2
GU046774
Avian
Germany
2007
2010-01-27
Yes
New Sequence!
A/wild duck/Bavaria/13/2007
2.2
GU046776
Avian
Germany
2007
2010-01-27
Yes
New Sequence!
A/wild duck/Bavaria/14/2007
2.2
GU046780
Avian
Germany
2007
2010-01-27
Yes
New Sequence!
A/chicken/Egypt/0987alb-NLQP/2009
2.2
GU370127
Avian
Egypt
2009
2010-01-26
Yes
New Sequence!
A/chicken/Nigeria/08RS848-1/2006
2.2
CY048083
Avian
Nigeria
2006
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-100/2007
2.2
CY048099
Avian
Nigeria
2007
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-102/2007
2.2
CY048107
Avian
Nigeria
2007
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-104/2007
2.2
CY048115
Avian
Nigeria
2007
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-106/2007
2.2
CY048123
Avian
Nigeria
2007
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-110/2007
2.2
CY048131
Avian
Nigeria
2007
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-111/2007
2.2
CY048139
Avian
Nigeria
2007
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-115/2007
2.2
CY048147
Avian
Nigeria
2007
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-117/2007
2.2
CY048155
Avian
Nigeria
2007
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-118/2007
2.2
CY048163
Avian
Nigeria
2007
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-121/2007
2.2
CY048187
Avian
Nigeria
2007
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-122/2007
2.2
CY048195
Avian
Nigeria
2007
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-14/2006
2.2
CY048203
Avian
Nigeria
2006
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-15/2006
2.2
CY048211
Avian
Nigeria
2006
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-17/2006
2.2
CY048219
Avian
Nigeria
2006
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-21/2006
2.2
CY048235
Avian
Nigeria
2006
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-22/2006
2.2
CY048243
Avian
Nigeria
2006
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-24/2006
2.2
CY048251
Avian
Nigeria
2006
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-26/2006
2.2
CY048259
Avian
Nigeria
2006
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-28/2006
2.2
CY048267
Avian
Nigeria
2006
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-33/2006
2.2
CY048275
Avian
Nigeria
2006
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-35/2006
2.2
CY048283
Avian
Nigeria
2006
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-38/2006
2.2
CY048291
Avian
Nigeria
2006
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-39/2006
2.2
CY048299
Avian
Nigeria
2006
2010-01-13
Yes
New Sequence!
A/chicken/Nigeria/08RS848-4/2006
2.2
CY048307
Avian
Nigeria
2006
2010-01-13
Yes
New Sequence!
< 1