Highly Pathogenic Avian Influenza (HPAI) H5N1 HA clade prediction
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Search Segment Database By:
Host(s)
Continent(s)/Countries
Clade(s)
Any
Avian
Blow fly
Canine
Cat
Civet
Environment
Equine
Human
Leopard
Mink
Pika
Plateau pika
Raccoon dog
Stone marten
Swine
Tiger
Any
Africa
Antartica
Eurasia
North America
Oceania
South America
Any
0
Outliers
1
2.1.1
2.1.2
2.1.3
2.2
2.3.1
2.3.2
2.3.3
2.3.4
2.4
2.5
3
4
5
6
7
8
9
Year From
-
To
-
Text (e.g., Nigeria)
Date Processed:
YYYY
-
MM
-
DD
-
-
Total Results: 4450
< 1
A/pied magpie/Liaoning/7/2006
HM172456
Avian
China
2006
2010-08-15
No
A/Anhui/1/2005
2.3.4
HM172104
Human
China
2005
2010-08-11
Yes
New Sequence!
A/Anhui/2/2005
2.3.4
HM172072
Human
China
2005
2010-08-11
Yes
New Sequence!
A/Guangxi/1/2005
2.3.4
HM172110
Human
China
2005
2010-08-11
Yes
New Sequence!
A/Thailand/WRAIR1720H/2004
1
CY069581
Human
Thailand
2004
2010-08-11
Yes
New Sequence!
A/Thailand/WRAIR1721H/2004
1
CY069589
Human
Thailand
2004
2010-08-11
Yes
New Sequence!
A/Thailand/WRAIR1722H/2004
1
CY069597
Human
Thailand
2004
2010-08-11
Yes
New Sequence!
A/Thailand/WRAIR1723H/2004
1
CY069605
Human
Thailand
2004
2010-08-11
Yes
New Sequence!
A/Thailand/WRAIR1724H/2004
1
CY069613
Human
Thailand
2004
2010-08-11
Yes
New Sequence!
A/bar-headed goose/Qinghai/1-HVRI/2006
2.2
HM172085
Avian
China
2006
2010-08-11
Yes
New Sequence!
A/bar-headed goose/Qinghai/3/2005
2.2
HM172454
Avian
China
2005
2010-08-11
Yes
New Sequence!
A/bar-headed goose/Tibet/8/2006
2.2
HM172087
Avian
China
2006
2010-08-11
Yes
New Sequence!
A/chicken/Anhui/39/2004
HM172095
Avian
China
2004
2010-08-11
No
Did not meet Thresholds!
A/chicken/Fujian/1/2007
2.3.4
HM172096
Avian
China
2007
2010-08-11
Yes
New Sequence!
A/chicken/Gansu/44/2004
HM172075
Avian
China
2004
2010-08-11
No
Did not meet Thresholds!
A/chicken/Guizhou/7/2008
HM172079
Avian
China
2008
2010-08-11
No
Did not meet Thresholds!
A/chicken/Hebei/A-8/2009
HM172081
Avian
China
2009
2010-08-11
No
Did not meet Thresholds!
A/chicken/Henan/A-7/2006
HM172080
Avian
China
2006
2010-08-11
No
Did not meet Thresholds!
A/chicken/Hunan/1/2009
HM172074
Avian
China
2009
2010-08-11
No
Did not meet Thresholds!
A/chicken/Hunan/21/2005
2.3.4
HM172112
Avian
China
2005
2010-08-11
Yes
New Sequence!
A/chicken/Hunan/41/2004
9
HM172114
Avian
China
2004
2010-08-11
Yes
New Sequence!
A/chicken/Jiangsu/18/2008
HM172092
Avian
China
2008
2010-08-11
No
Did not meet Thresholds!
A/chicken/Jiangxi/25/2004
2.5
HM172455
Avian
China
2004
2010-08-11
Yes
New Sequence!
A/chicken/Liaoning/23/2005
2.2
HM172453
Avian
China
2005
2010-08-11
Yes
New Sequence!
A/chicken/Liaoning/A-1/2007
HM172078
Avian
China
2007
2010-08-11
No
Did not meet Thresholds!
A/chicken/Liaoning/A-11/2006
HM172077
Avian
China
2006
2010-08-11
No
Did not meet Thresholds!
A/chicken/Ningxia/24/2006
HM172076
Avian
China
2006
2010-08-11
No
Did not meet Thresholds!
A/chicken/Shandong/A-1/2009
HM172093
Avian
China
2009
2010-08-11
No
Did not meet Thresholds!
A/chicken/Shandong/A-10/2006
HM172073
Avian
China
2006
2010-08-11
No
Did not meet Thresholds!
A/chicken/Shandong/A-5/2006
HM172082
Avian
China
2006
2010-08-11
No
Did not meet Thresholds!
A/chicken/Shanxi/10/2006
HM172113
Avian
China
2006
2010-08-11
No
Did not meet Thresholds!
A/chicken/Sichuan/81/2005
2.3.4
HM172069
Avian
China
2005
2010-08-11
Yes
New Sequence!
A/chicken/Tibet/6/2008
HM172086
Avian
China
2008
2010-08-11
No
Did not meet Thresholds!
A/chicken/Xinjiang/16/2005
3
HM172108
Avian
China
2005
2010-08-11
Yes
New Sequence!
A/chicken/Xinjiang/17/2005
7
HM172102
Avian
China
2005
2010-08-11
Yes
New Sequence!
A/chicken/Xinjiang/27/2006
HM172091
Avian
China
2006
2010-08-11
No
Did not meet Thresholds!
A/chicken/Xinjiang/28/2006
HM172090
Avian
China
2006
2010-08-11
No
Did not meet Thresholds!
A/chicken/Xinjiang/53/2005
HM172094
Avian
China
2005
2010-08-11
No
Did not meet Thresholds!
A/chicken/Xinjiang/54/2005
7
HM172111
Avian
China
2005
2010-08-11
Yes
New Sequence!
A/chicken/Xinjiang/67/2005
7
HM172099
Avian
China
2005
2010-08-11
Yes
New Sequence!
A/chicken/Xinjiang/68/2005
7
HM172106
Avian
China
2005
2010-08-11
Yes
New Sequence!
A/chicken/Xinjiang/78/2005
7
HM172103
Avian
China
2005
2010-08-11
Yes
New Sequence!
A/duck/Anhui/1/06
2.3.4
HM172115
Avian
China
2006
2010-08-11
Yes
New Sequence!
A/duck/Anhui/56/2005
2.3.4
HM172107
Avian
China
2005
2010-08-11
Yes
New Sequence!
A/duck/Guangdong/23/2004
2.3.2
HM172116
Avian
China
2004
2010-08-11
Yes
New Sequence!
A/duck/Hubei/49/2005
2.3.4
HM172071
Avian
China
2005
2010-08-11
Yes
New Sequence!
A/duck/Hunan/11/2007
2.3.4
HM172088
Avian
China
2007
2010-08-11
Yes
New Sequence!
A/duck/Hunan/29/2006
2.3.4
HM172097
Avian
China
2006
2010-08-11
Yes
New Sequence!
A/duck/Hunan/69/2004
2.3.3
HM172098
Avian
China
2004
2010-08-11
Yes
New Sequence!
A/duck/Hunan/70/2004
2.3.2
HM172105
Avian
China
2004
2010-08-11
Yes
New Sequence!
< 1